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My Researches

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  • My Researches

Journal Articles

John J et al.
Bhattacharyya U, John J, Lam M, Fisher J, Sun B, Baird D, Burgess S, Chen CY, Lencz T.
Circulating Blood-Based Proteins in Psychopathology and Cognition: A Mendelian Randomization Study.
JAMA Psychiatry. 2025 May 1;82(5):481-491.
Bhattacharyya U, John J, Lencz T, Lam M.
Dissecting Schizophrenia Biology Using Pleiotropy With Cognitive Genomics.
Biol Psychiatry. 2025 Feb 22: S0006-3223(25)00989-8. Epub ahead of print.
John J, Bhattacharyya U, Yadav N, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Multiple rare inherited variants in a four generation schizophrenia family offer leads for complex mode of disease inheritance.
Schizophr Res. 2020 Feb;216:288-294. Epub 2019 Dec 5.
John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare variant based evidence for oligogenic contribution of neurodevelopmental pathway genes to schizophrenia.
Schizophr Res. 2019 Aug;210:296-298.
John J, Kukshal P, Sharma A, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare variants in Protein tyrosine phosphatase, receptor type A (PTPRA) in schizophrenia: Evidence from a family based study.
Schizophr Res. 2019 Apr;206:75-81. Epub 2018 Dec 27.
John J, Sharma A, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare Variants in Tissue Inhibitor of Metalloproteinase 2 as a Risk Factor for Schizophrenia: Evidence From Familial and Cohort Analysis.
Schizophr Bull. 2019 Jan 1;45(1):256-263.
Chaudhuri Z, John J, Aneja S, Thelma BK.
Pedigree Analysis of Familial Primary Concomitant Horizontal Strabismus in Northern India.
Strabismus. 2017 Dec;25(4):200-213. Epub 2017 Aug 10.
John J, Kukshal P, Bhatia T, Chowdari KV, Nimgaonkar VL, Deshpande SN, Thelma BK.
Possible role of rare variants in Trace amine associated receptor 1 in schizophrenia.
Schizophr Res. 2017 Nov;189:190-195.
John J, Bhatia T, Kukshal P, Chandna P, Nimgaonkar VL, Deshpande SN, Thelma BK.
Association study of MiRSNPs with schizophrenia, tardive dyskinesia and cognition.
Schizophr Res. 2016 Jul;174(1-3):29-34.

Pre Prints

John J — Publication
J John, P Kukshal, T Bhatia, R Harripaul, VL Nimgaonkar, SN Deshpande, B.K. Thelma. Oligogenic rare variant contributions in schizophrenia and their convergence with genes harbouring de novo mutations in schizophrenia, autism and intellectual disability: Evidence from multiplex families bioRxiv 829101.
doi:10.1101/829101

Conference Papers

John J — Publications
  1. Bhattacharyya U, John J, Lam M, Fisher J, Sun B, Baird D, Burgess S, Chen CY, Lencz T. Circulating Blood-Based Proteins in Psychopathology and Cognition: A Mendelian Randomization Study. JAMA Psychiatry. 2025 May 1;82(5):481-491.
    doi:10.1001/jamapsychiatry.2025.0033 PMID: 40072421 PMCID: PMC11904806
  2. Bhattacharyya U, John J, Lencz T, Lam M. Dissecting Schizophrenia Biology Using Pleiotropy With Cognitive Genomics. Biol Psychiatry. 2025 Feb 22:S0006-3223(25)00989-8. Epub ahead of print.
    doi:10.1016/j.biopsych.2025.02.890 PMID: 39993652 PMCID: PMC12353775
  3. John J, Bhattacharyya U, Yadav N, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Multiple rare inherited variants in a four generation schizophrenia family offer leads for complex mode of disease inheritance. Schizophr Res. 2020 Feb;216:288-294. Epub 2019 Dec 5.
    doi:10.1016/j.schres.2019.11.041 PMID: 31813803 PMCID: PMC8958857
  4. John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare variant based evidence for oligogenic contribution of neurodevelopmental pathway genes to schizophrenia. Schizophr Res. 2019 Aug;210:296-298.
    doi:10.1016/j.schres.2018.12.045 PMID: 30612842 PMCID: PMC7018639
  5. John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare variants in Protein tyrosine phosphatase, receptor type A (PTPRA) in schizophrenia: Evidence from a family based study. Schizophr Res. 2019 Apr;206:75-81. Epub 2018 Dec 27.
    doi:10.1016/j.schres.2018.12.012 PMID: 30594456 PMCID: PMC7321970
  6. John J, Sharma A, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare Variants in Tissue Inhibitor of Metalloproteinase 2 as a Risk Factor for Schizophrenia: Evidence From Familial and Cohort Analysis. Schizophr Bull. 2019 Jan 1;45(1):256-263.
    doi:10.1093/schbul/sbx196 PMID: 29385606 PMCID: PMC6293225
  7. Chaudhuri Z, John J, Aneja S, Thelma BK. Pedigree Analysis of Familial Primary Concomitant Horizontal Strabismus in Northern India. Strabismus. 2017 Dec;25(4):200-213. Epub 2017 Aug 10.
    doi:10.1080/09273972.2017.1350865 PMID: 28796570
  8. J John, P Kukshal, T Bhatia, R Harripaul, VL Nimgaonkar, SN Deshpande, B.K. Thelma Oligogenic rare variant contributions in schizophrenia and their convergence with genes harbouring de novo mutations in schizophrenia, autism and intellectual disability: Evidence from multiplex families bioRxiv 829101
    doi:10.1101/829101
John J et al.
Bhattacharyya U, John J, Lam M, Fisher J, Sun B, Baird D, Burgess S, Chen CY, Lencz T.
Circulating Blood-Based Proteins in Psychopathology and Cognition: A Mendelian Randomization Study.
JAMA Psychiatry. 2025 May 1;82(5):481-491.
Bhattacharyya U, John J, Lencz T, Lam M.
Dissecting Schizophrenia Biology Using Pleiotropy With Cognitive Genomics.
Biol Psychiatry. 2025 Feb 22: S0006-3223(25)00989-8. Epub ahead of print.
John J, Bhattacharyya U, Yadav N, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Multiple rare inherited variants in a four generation schizophrenia family offer leads for complex mode of disease inheritance.
Schizophr Res. 2020 Feb;216:288-294. Epub 2019 Dec 5.
John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare variant based evidence for oligogenic contribution of neurodevelopmental pathway genes to schizophrenia.
Schizophr Res. 2019 Aug;210:296-298.
John J, Kukshal P, Sharma A, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare variants in Protein tyrosine phosphatase, receptor type A (PTPRA) in schizophrenia: Evidence from a family based study.
Schizophr Res. 2019 Apr;206:75-81. Epub 2018 Dec 27.
John J, Sharma A, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK.
Rare Variants in Tissue Inhibitor of Metalloproteinase 2 as a Risk Factor for Schizophrenia: Evidence From Familial and Cohort Analysis.
Schizophr Bull. 2019 Jan 1;45(1):256-263.
Chaudhuri Z, John J, Aneja S, Thelma BK.
Pedigree Analysis of Familial Primary Concomitant Horizontal Strabismus in Northern India.
Strabismus. 2017 Dec;25(4):200-213. Epub 2017 Aug 10.
John J, Kukshal P, Bhatia T, Chowdari KV, Nimgaonkar VL, Deshpande SN, Thelma BK.
Possible role of rare variants in Trace amine associated receptor 1 in schizophrenia.
Schizophr Res. 2017 Nov;189:190-195.
John J, Bhatia T, Kukshal P, Chandna P, Nimgaonkar VL, Deshpande SN, Thelma BK.
Association study of MiRSNPs with schizophrenia, tardive dyskinesia and cognition.
Schizophr Res. 2016 Jul;174(1-3):29-34.
John J — Publication
J John, P Kukshal, T Bhatia, R Harripaul, VL Nimgaonkar, SN Deshpande, B.K. Thelma. Oligogenic rare variant contributions in schizophrenia and their convergence with genes harbouring de novo mutations in schizophrenia, autism and intellectual disability: Evidence from multiplex families bioRxiv 829101.
doi:10.1101/829101
John J — Publications
  1. Bhattacharyya U, John J, Lam M, Fisher J, Sun B, Baird D, Burgess S, Chen CY, Lencz T. Circulating Blood-Based Proteins in Psychopathology and Cognition: A Mendelian Randomization Study. JAMA Psychiatry. 2025 May 1;82(5):481-491.
    doi:10.1001/jamapsychiatry.2025.0033 PMID: 40072421 PMCID: PMC11904806
  2. Bhattacharyya U, John J, Lencz T, Lam M. Dissecting Schizophrenia Biology Using Pleiotropy With Cognitive Genomics. Biol Psychiatry. 2025 Feb 22:S0006-3223(25)00989-8. Epub ahead of print.
    doi:10.1016/j.biopsych.2025.02.890 PMID: 39993652 PMCID: PMC12353775
  3. John J, Bhattacharyya U, Yadav N, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Multiple rare inherited variants in a four generation schizophrenia family offer leads for complex mode of disease inheritance. Schizophr Res. 2020 Feb;216:288-294. Epub 2019 Dec 5.
    doi:10.1016/j.schres.2019.11.041 PMID: 31813803 PMCID: PMC8958857
  4. John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare variant based evidence for oligogenic contribution of neurodevelopmental pathway genes to schizophrenia. Schizophr Res. 2019 Aug;210:296-298.
    doi:10.1016/j.schres.2018.12.045 PMID: 30612842 PMCID: PMC7018639
  5. John J, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare variants in Protein tyrosine phosphatase, receptor type A (PTPRA) in schizophrenia: Evidence from a family based study. Schizophr Res. 2019 Apr;206:75-81. Epub 2018 Dec 27.
    doi:10.1016/j.schres.2018.12.012 PMID: 30594456 PMCID: PMC7321970
  6. John J, Sharma A, Kukshal P, Bhatia T, Nimgaonkar VL, Deshpande SN, Thelma BK. Rare Variants in Tissue Inhibitor of Metalloproteinase 2 as a Risk Factor for Schizophrenia: Evidence From Familial and Cohort Analysis. Schizophr Bull. 2019 Jan 1;45(1):256-263.
    doi:10.1093/schbul/sbx196 PMID: 29385606 PMCID: PMC6293225
  7. Chaudhuri Z, John J, Aneja S, Thelma BK. Pedigree Analysis of Familial Primary Concomitant Horizontal Strabismus in Northern India. Strabismus. 2017 Dec;25(4):200-213. Epub 2017 Aug 10.
    doi:10.1080/09273972.2017.1350865 PMID: 28796570
  8. J John, P Kukshal, T Bhatia, R Harripaul, VL Nimgaonkar, SN Deshpande, B.K. Thelma Oligogenic rare variant contributions in schizophrenia and their convergence with genes harbouring de novo mutations in schizophrenia, autism and intellectual disability: Evidence from multiplex families bioRxiv 829101
    doi:10.1101/829101
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About

I am Jibin John, a human geneticist and bioinformatician with over eight years of experience. I specialize in analyzing Next Generation Sequencing (NGS) and SNP microarray data to uncover the genetic basis of diseases. My expertise lies in building and managing automated data analysis pipelines, and I use statistical analysis to connect genetic variants and genes to disease biology.

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Email

johnjibinv@gmail.com

Phone

+1-516-288-8006

Address

New York, USA

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